Difference between revisions of "SJ15649"
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(Created page with "Category:gene == Gene SJ10458 == * transcription-direction: ** negative * right-end-position: ** 388083 * left-end-position: ** 375378 * centisome-position: ** 96.04587...") |
(Created page with "Category:gene == Gene SJ20537 == * transcription-direction: ** positive * right-end-position: ** 118788 * left-end-position: ** 113600 * centisome-position: ** 54.9618...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20537 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 118788 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 113600 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 54.9618 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-14932]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[UDPNACETYLMURAMATEDEHYDROG-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[MGLDLCTANA-PWY]] |
** '''2''' reactions found over '''4''' reactions in the full pathway | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| − | {{#set: transcription-direction= | + | * [[PWY-6387]] |
| − | {{#set: right-end-position= | + | ** '''2''' reactions found over '''8''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY0-1261]] |
| − | {{#set: centisome-position= | + | ** '''3''' reactions found over '''12''' reactions in the full pathway |
| + | * [[PWY-7953]] | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-6386]] | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=118788}} | ||
| + | {{#set: left-end-position=113600}} | ||
| + | {{#set: centisome-position=54.9618 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 15:21, 5 January 2021
Contents
Gene SJ20537
- transcription-direction:
- positive
- right-end-position:
- 118788
- left-end-position:
- 113600
- centisome-position:
- 54.9618
Organism(s) associated with this gene
Reaction(s) associated
- D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14932
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- UDPNACETYLMURAMATEDEHYDROG-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- MGLDLCTANA-PWY
- 2 reactions found over 4 reactions in the full pathway
- PWY-6387
- 2 reactions found over 8 reactions in the full pathway
- PWY0-1261
- 3 reactions found over 12 reactions in the full pathway
- PWY-7953
- 2 reactions found over 8 reactions in the full pathway
- PWY-6386
- 2 reactions found over 8 reactions in the full pathway
