Difference between revisions of "SJ15676"

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(Created page with "Category:gene == Gene SJ11687 == * transcription-direction: ** positive * right-end-position: ** 348307 * left-end-position: ** 338918 * centisome-position: ** 91.77557...")
(Created page with "Category:gene == Gene SJ15676 == * transcription-direction: ** negative * right-end-position: ** 133764 * left-end-position: ** 124472 * centisome-position: ** 42.516445...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11687 ==
+
== Gene SJ15676 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 348307
+
** 133764
 
* left-end-position:
 
* left-end-position:
−
** 338918
+
** 124472
 
* centisome-position:
 
* centisome-position:
−
** 91.77557    
+
** 42.516445    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RIBULP3EPIM-RXN]]
+
* [[3.6.4.6-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ATPASE-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: transcription-direction=negative}}
−
== Pathway(s) associated ==
+
{{#set: right-end-position=133764}}
−
* [[PWY-1861]]
+
{{#set: left-end-position=124472}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=42.516445   }}
−
* [[P21-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[CALVIN-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=348307}}
 
−
{{#set: left-end-position=338918}}
 
−
{{#set: centisome-position=91.77557   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=8}}
 

Latest revision as of 11:09, 18 March 2021

Gene SJ15676

  • transcription-direction:
    • negative
  • right-end-position:
    • 133764
  • left-end-position:
    • 124472
  • centisome-position:
    • 42.516445

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15676&oldid=135923"