Difference between revisions of "SJ15728"

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(Created page with "Category:gene == Gene SJ10333 == * transcription-direction: ** positive * right-end-position: ** 54175 * left-end-position: ** 49473 * centisome-position: ** 12.601985...")
(Created page with "Category:gene == Gene SJ05870 == * transcription-direction: ** negative * right-end-position: ** 81854 * left-end-position: ** 68644 * centisome-position: ** 79.07930...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10333 ==
+
== Gene SJ05870 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 54175
+
** 81854
 
* left-end-position:
 
* left-end-position:
−
** 49473
+
** 68644
 
* centisome-position:
 
* centisome-position:
−
** 12.601985    
+
** 79.07930    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GPPSYN-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN-2761]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6545]]
−
* [[PWY-6383]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[PWY-7410]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-7102]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-6859]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7736]]
+
{{#set: right-end-position=81854}}
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
{{#set: left-end-position=68644}}
−
* [[PWY-5122]]
+
{{#set: centisome-position=79.07930   }}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
* [[PWY-7141]]
+
{{#set: nb reaction associated=5}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: nb pathway associated=4}}
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1581]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=54175}}
 
−
{{#set: left-end-position=49473}}
 
−
{{#set: centisome-position=12.601985   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=12}}
 

Revision as of 20:26, 18 December 2020

Gene SJ05870

  • transcription-direction:
    • negative
  • right-end-position:
    • 81854
  • left-end-position:
    • 68644
  • centisome-position:
    • 79.07930

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15728&oldid=43835"