Difference between revisions of "SJ15799"
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(Created page with "Category:gene == Gene SJ10078 == * transcription-direction: ** negative * right-end-position: ** 377991 * left-end-position: ** 371551 * centisome-position: ** 93.26875...") |
(Created page with "Category:gene == Gene SJ15799 == * transcription-direction: ** negative * right-end-position: ** 21459 * left-end-position: ** 17988 * centisome-position: ** 2.591524...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ15799 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 21459 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 17988 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 2.591524 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[PYRIDOXINE-4-DEHYDROGENASE-RXN]] | |
| − | |||
| − | |||
| − | |||
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
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| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-1884]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN1A0-6303]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7204]] |
| − | |||
| − | |||
| − | |||
| − | |||
** '''9''' reactions found over '''9''' reactions in the full pathway | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-7282]] |
| − | ** ''' | + | ** '''6''' reactions found over '''10''' reactions in the full pathway |
| + | * [[PWY-882]] | ||
| + | ** '''6''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY1A0-6325]] | ||
| + | ** '''1''' reactions found over '''12''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=21459}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=17988}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=2.591524 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
{{#set: nb pathway associated=4}} | {{#set: nb pathway associated=4}} | ||
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ15799
- transcription-direction:
- negative
- right-end-position:
- 21459
- left-end-position:
- 17988
- centisome-position:
- 2.591524
Organism(s) associated with this gene
Reaction(s) associated
- PYRIDOXINE-4-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1884
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN1A0-6303
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-7204
- 9 reactions found over 9 reactions in the full pathway
- PWY-7282
- 6 reactions found over 10 reactions in the full pathway
- PWY-882
- 6 reactions found over 5 reactions in the full pathway
- PWY1A0-6325
- 1 reactions found over 12 reactions in the full pathway
