Difference between revisions of "SJ15840"

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(Created page with "Category:gene == Gene SJ22477 == * transcription-direction: ** negative * right-end-position: ** 45372 * left-end-position: ** 39454 * centisome-position: ** 22.381565...")
(Created page with "Category:gene == Gene SJ19466 == * transcription-direction: ** positive * right-end-position: ** 202353 * left-end-position: ** 197324 * centisome-position: ** 87.02233...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22477 ==
+
== Gene SJ19466 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 45372
+
** 202353
 
* left-end-position:
 
* left-end-position:
−
** 39454
+
** 197324
 
* centisome-position:
 
* centisome-position:
−
** 22.381565    
+
** 87.02233    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ADPART]]
−
* [[2.3.1.23-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ATPPHOSPHORIBOSYLTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.3.1.67-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PLASMALOGEN-SYNTHASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15036]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15066]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16041]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16042]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16043]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16044]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16045]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16150]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16151]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16152]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16157]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16158]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17688]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9670]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[HISTSYN-PWY]]
−
* [[PWY-7470]]
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-6803]]
+
{{#set: right-end-position=202353}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=197324}}
−
* [[PWY-7409]]
+
{{#set: centisome-position=87.02233   }}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7416]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6958]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5353]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5995]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6433]]
 
−
** '''17''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-7618]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7053]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5368]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=45372}}
 
−
{{#set: left-end-position=39454}}
 
−
{{#set: centisome-position=22.381565   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=17}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=1}}

Revision as of 11:02, 15 January 2021

Gene SJ19466

  • transcription-direction:
    • positive
  • right-end-position:
    • 202353
  • left-end-position:
    • 197324
  • centisome-position:
    • 87.02233

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HISTSYN-PWY
    • 10 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15840&oldid=105600"