Difference between revisions of "SJ15949"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14122 CPD-14122] == * common-name: ** 2-deoxy-scyllo-inosamine * smiles: ** c1(c([n+])c(o)c...")
(Created page with "Category:gene == Gene SJ15949 == * transcription-direction: ** negative * right-end-position: ** 79869 * left-end-position: ** 64576 * centisome-position: ** 22.334513...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14122 CPD-14122] ==
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== Gene SJ15949 ==
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* common-name:
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* transcription-direction:
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** 2-deoxy-scyllo-inosamine
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** negative
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* smiles:
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* right-end-position:
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** c1(c([n+])c(o)c(o)c(o)c(o)1)
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** 79869
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* inchi-key:
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* left-end-position:
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** qxqnrsuoynmxdl-kgjvwpdlsa-o
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** 64576
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* molecular-weight:
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* centisome-position:
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** 164.181
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** 22.334513   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13118]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=2-deoxy-scyllo-inosamine}}
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* [[ASPCARBTRANS-RXN]]
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{{#set: inchi-key=inchikey=qxqnrsuoynmxdl-kgjvwpdlsa-o}}
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** Category: [[annotation]]
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{{#set: molecular-weight=164.181}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[CARBPSYN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[DIHYDROOROT-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLUTAMIN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13202]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16909]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16910]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5686]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7790]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7791]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7400]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[ARGSYN-PWY]]
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** '''5''' reactions found over '''4''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5154]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[CITRULBIO-PWY]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[GLUTAMINDEG-PWY]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-4984]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7693]]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=79869}}
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{{#set: left-end-position=64576}}
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{{#set: centisome-position=22.334513    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=11}}

Revision as of 20:21, 18 December 2020

Gene SJ15949

  • transcription-direction:
    • negative
  • right-end-position:
    • 79869
  • left-end-position:
    • 64576
  • centisome-position:
    • 22.334513

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5686
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7790
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7791
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7693
    • 3 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15949&oldid=41560"