Difference between revisions of "SJ15983"

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(Created page with "Category:gene == Gene SJ16813 == * transcription-direction: ** negative * right-end-position: ** 41310 * left-end-position: ** 15520 * centisome-position: ** 5.6094694...")
(Created page with "Category:gene == Gene SJ21782 == * transcription-direction: ** negative * right-end-position: ** 80450 * left-end-position: ** 47546 * centisome-position: ** 25.505049...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16813 ==
+
== Gene SJ21782 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 41310
+
** 80450
 
* left-end-position:
 
* left-end-position:
−
** 15520
+
** 47546
 
* centisome-position:
 
* centisome-position:
−
** 5.6094694    
+
** 25.505049    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-8988]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[SUCCCOASYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10711]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUCL_LPAREN_gdp_RPAREN_m]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-5749]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[P42-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5392]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5690]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5913]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5538]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5537]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[P23-PWY]]
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7384]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 
</div>
 
</div>
−
== Pathway(s) associated ==
 
−
* [[PWY-6303]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6857]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=41310}}
+
{{#set: right-end-position=80450}}
−
{{#set: left-end-position=15520}}
+
{{#set: left-end-position=47546}}
−
{{#set: centisome-position=5.6094694   }}
+
{{#set: centisome-position=25.505049   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=13}}

Revision as of 14:47, 5 January 2021

Gene SJ21782

  • transcription-direction:
    • negative
  • right-end-position:
    • 80450
  • left-end-position:
    • 47546
  • centisome-position:
    • 25.505049

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5749
    • 1 reactions found over 4 reactions in the full pathway
  • P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5392
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-5538
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • P23-PWY
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15983&oldid=55399"