Difference between revisions of "SJ15988"

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(Created page with "Category:gene == Gene SJ01572 == * transcription-direction: ** negative * right-end-position: ** 498198 * left-end-position: ** 462805 * centisome-position: ** 84.12342...")
(Created page with "Category:gene == Gene SJ15088 == * transcription-direction: ** positive * right-end-position: ** 269222 * left-end-position: ** 259483 * centisome-position: ** 85.94486...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01572 ==
+
== Gene SJ15088 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 498198
+
** 269222
 
* left-end-position:
 
* left-end-position:
−
** 462805
+
** 259483
 
* centisome-position:
 
* centisome-position:
−
** 84.12342    
+
** 85.94486    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.3.16-RXN]]
−
* [[1.11.1.12-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTATHIONE-PEROXIDASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=269222}}
−
* [[PEROXID-RXN]]
+
{{#set: left-end-position=259483}}
−
** Category: [[annotation]]
+
{{#set: centisome-position=85.94486   }}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-4081]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[DETOX1-PWY-1]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7214]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7445]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5466]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6824]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=498198}}
 
−
{{#set: left-end-position=462805}}
 
−
{{#set: centisome-position=84.12342   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=8}}
 

Revision as of 15:19, 5 January 2021

Gene SJ15088

  • transcription-direction:
    • positive
  • right-end-position:
    • 269222
  • left-end-position:
    • 259483
  • centisome-position:
    • 85.94486

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15988&oldid=68729"