Difference between revisions of "SJ16014"

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(Created page with "Category:gene == Gene SJ09087 == * transcription-direction: ** positive * right-end-position: ** 341500 * left-end-position: ** 317846 * centisome-position: ** 74.58827...")
(Created page with "Category:gene == Gene SJ16014 == * transcription-direction: ** negative * right-end-position: ** 277716 * left-end-position: ** 265477 * centisome-position: ** 38.390522...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09087 ==
+
== Gene SJ16014 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 341500
+
** 277716
 
* left-end-position:
 
* left-end-position:
−
** 317846
+
** 265477
 
* centisome-position:
 
* centisome-position:
−
** 74.58827    
+
** 38.390522    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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* [[1.14.13.78-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-1121]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12510]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13492]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13493]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13494]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13506]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-3661]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-5242]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7580]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7651]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
+
{{#set: transcription-direction=negative}}
−
== Pathway(s) associated ==
+
{{#set: right-end-position=277716}}
−
* [[PWY-5047]]
+
{{#set: left-end-position=265477}}
−
** '''6''' reactions found over '''15''' reactions in the full pathway
+
{{#set: centisome-position=38.390522   }}
−
* [[PWY-5034]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-2181]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3101]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7066]]
 
−
** '''3''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5640]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5060]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY1F-467]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1121]]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=341500}}
 
−
{{#set: left-end-position=317846}}
 
−
{{#set: centisome-position=74.58827   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=13}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=9}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ16014

  • transcription-direction:
    • negative
  • right-end-position:
    • 277716
  • left-end-position:
    • 265477
  • centisome-position:
    • 38.390522

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16014&oldid=134835"