Difference between revisions of "SJ16041"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LYSOSOMAL-ENZYME-D-MANNOSE LYSOSOMAL-ENZYME-D-MANNOSE] == * common-name: ** an α-d-man-(1...")
(Created page with "Category:gene == Gene SJ07072 == * transcription-direction: ** negative * right-end-position: ** 318235 * left-end-position: ** 304028 * centisome-position: ** 65.47474...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LYSOSOMAL-ENZYME-D-MANNOSE LYSOSOMAL-ENZYME-D-MANNOSE] ==
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== Gene SJ07072 ==
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* common-name:
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* transcription-direction:
−
** an α-d-man-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-l-asparaginyl-[lysosomal protein]
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** negative
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[2.7.8.17-RXN]]
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** 318235
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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== Reaction(s) of unknown directionality ==
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** 304028
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{{#set: common-name=an α-d-man-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-l-asparaginyl-[lysosomal protein]}}
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* centisome-position:
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** 65.47474   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_sterols_curated]]
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[ADOMET-DMK-METHYLTRANSFER-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11046]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11754]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14177]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9191]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9205]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9220]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9227]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9235]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9242]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9361]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9362]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9363]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN3O-54]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6708]]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5870]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[MENAQUINONESYN-PWY]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5839]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5844]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5849]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5855]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5873]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5857]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5872]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5856]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5871]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5890]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5891]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5892]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5895]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7230]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7233]]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY3O-19]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=318235}}
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{{#set: left-end-position=304028}}
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{{#set: centisome-position=65.47474    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=16}}
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{{#set: nb pathway associated=19}}

Revision as of 20:21, 18 December 2020

Gene SJ07072

  • transcription-direction:
    • negative
  • right-end-position:
    • 318235
  • left-end-position:
    • 304028
  • centisome-position:
    • 65.47474

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5870
    • 4 reactions found over 9 reactions in the full pathway
  • MENAQUINONESYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5839
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5844
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5849
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5855
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5856
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5871
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5890
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5891
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5892
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5895
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7233
    • 3 reactions found over 10 reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16041&oldid=41473"