Difference between revisions of "SJ16082"

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(Created page with "Category:gene == Gene SJ17677 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * BRANCHED-CHAINAMINOTRANS...")
(Created page with "Category:gene == Gene SJ22197 == * transcription-direction: ** positive * right-end-position: ** 99188 * left-end-position: ** 93681 * centisome-position: ** 52.185028...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17677 ==
+
== Gene SJ22197 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 99188
 +
* left-end-position:
 +
** 93681
 +
* centisome-position:
 +
** 52.185028   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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* [[RXN-15556]]
** Category: [[orthology]]
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** Category: [[annotation]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7511]]
* [[ILEUSYN-PWY]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
** '''4''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
* [[ILEUDEG-PWY]]
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{{#set: right-end-position=99188}}
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=93681}}
* [[PWY-5078]]
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{{#set: centisome-position=52.185028    }}
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5103]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-5104]]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5101]]
 
** '''4''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5108]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[LEU-DEG2-PWY]]
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5076]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7767]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[LEUSYN-PWY]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[VALSYN-PWY]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[ALANINE-VALINESYN-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5057]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[VALDEG-PWY]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
</div>
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=15}}
+
{{#set: nb pathway associated=1}}

Revision as of 15:24, 5 January 2021

Gene SJ22197

  • transcription-direction:
    • positive
  • right-end-position:
    • 99188
  • left-end-position:
    • 93681
  • centisome-position:
    • 52.185028

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway