Difference between revisions of "SJ16091"

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(Created page with "Category:gene == Gene SJ06911 == * transcription-direction: ** positive * right-end-position: ** 32975 * left-end-position: ** 21259 * centisome-position: ** 29.17267...")
(Created page with "Category:gene == Gene SJ03718 == * transcription-direction: ** negative * right-end-position: ** 188706 * left-end-position: ** 176499 * centisome-position: ** 33.94897...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06911 ==
+
== Gene SJ03718 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 32975
+
** 188706
 
* left-end-position:
 
* left-end-position:
−
** 21259
+
** 176499
 
* centisome-position:
 
* centisome-position:
−
** 29.17267    
+
** 33.94897    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[1.8.1.4-RXN]]
−
* [[2.7.10.1-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[3.6.4.4-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[PYRNUTRANSHYDROGEN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[RXN-7716]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12195]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-7719]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-8629]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1132]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-5083]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-5084]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5046]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[GLYCLEAV-PWY]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PYRUVDEHYD-PWY]]
−
{{#set: right-end-position=32975}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=21259}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=29.17267   }}
+
{{#set: right-end-position=188706}}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: left-end-position=176499}}
−
{{#set: nb reaction associated=8}}
+
{{#set: centisome-position=33.94897   }}
−
{{#set: nb pathway associated=4}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=5}}

Revision as of 20:25, 18 December 2020

Gene SJ03718

  • transcription-direction:
    • negative
  • right-end-position:
    • 188706
  • left-end-position:
    • 176499
  • centisome-position:
    • 33.94897

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5084
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5046
    • 3 reactions found over 3 reactions in the full pathway
  • GLYCLEAV-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PYRUVDEHYD-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16091&oldid=43257"