Difference between revisions of "SJ16120"

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(Created page with "Category:gene == Gene SJ18830 == * transcription-direction: ** positive * right-end-position: ** 37454 * left-end-position: ** 26271 * centisome-position: ** 11.153424...")
(Created page with "Category:gene == Gene SJ07700 == * transcription-direction: ** negative * right-end-position: ** 15588 * left-end-position: ** 14863 * centisome-position: ** 23.65251...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18830 ==
+
== Gene SJ07700 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 37454
+
** 15588
 
* left-end-position:
 
* left-end-position:
−
** 26271
+
** 14863
 
* centisome-position:
 
* centisome-position:
−
** 11.153424    
+
** 23.65251    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[CHORISMATEMUT-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11135]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-3461]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6120]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PHESYN]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7626]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-3462]]
−
{{#set: right-end-position=37454}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=26271}}
+
* [[TYRSYN]]
−
{{#set: centisome-position=11.153424   }}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6627]]
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=15588}}
 +
{{#set: left-end-position=14863}}
 +
{{#set: centisome-position=23.65251   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Revision as of 11:04, 15 January 2021

Gene SJ07700

  • transcription-direction:
    • negative
  • right-end-position:
    • 15588
  • left-end-position:
    • 14863
  • centisome-position:
    • 23.65251

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3461
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6120
    • 2 reactions found over 3 reactions in the full pathway
  • PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7626
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-3462
    • 2 reactions found over 3 reactions in the full pathway
  • TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6627
    • 3 reactions found over 15 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16120&oldid=106829"