Difference between revisions of "SJ16156"

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(Created page with "Category:gene == Gene SJ11258 == * transcription-direction: ** positive * right-end-position: ** 257877 * left-end-position: ** 242680 * centisome-position: ** 64.86602...")
(Created page with "Category:gene == Gene SJ16156 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 3PGAREARR-RXN ** Categ...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ11258 ==
+
== Gene SJ16156 ==
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* transcription-direction:
 
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** positive
 
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* right-end-position:
 
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** 257877
 
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* left-end-position:
 
−
** 242680
 
−
* centisome-position:
 
−
** 64.86602   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 +
* [[3PGAREARR-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
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* [[PWY-6142]]
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** Category: [[annotation]]
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** '''10''' reactions found over '''13''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-7003]]
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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** '''8''' reactions found over '''6''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-7218]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''7''' reactions found over '''4''' reactions in the full pathway
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* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
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* [[GLYCOLYSIS]]
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** Category: [[orthology]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[P341-PWY]]
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* [[NUCLEOTIDASE-RXN]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-5723]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[RXN-14473]]
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* [[P124-PWY]]
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** Category: [[annotation]]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-2221]]
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* [[RXN-17947]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-5484]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[RXN-17948]]
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* [[PWY-1042]]
−
** Category: [[annotation]]
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PWY-6886]]
−
* [[RXN-7253]]
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** '''8''' reactions found over '''5''' reactions in the full pathway
−
** Category: [[orthology]]
+
* [[PWY-6901]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** '''10''' reactions found over '''8''' reactions in the full pathway
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* [[RXN0-5408]]
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* [[PWY-7124]]
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** Category: [[orthology]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 
</div>
 
</div>
−
== Pathway(s) associated ==
 
−
* [[PWY-2301]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-4702]]
 
−
** '''3''' reactions found over '''14''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=257877}}
 
−
{{#set: left-end-position=242680}}
 
−
{{#set: centisome-position=64.86602    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=14}}

Latest revision as of 11:10, 18 March 2021

Gene SJ16156

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-7003
    • 8 reactions found over 6 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-6901
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-7124
    • 8 reactions found over 8 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16156&oldid=136391"