Difference between revisions of "SJ16180"

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(Created page with "Category:gene == Gene SJ22556 == * transcription-direction: ** negative * right-end-position: ** 66802 * left-end-position: ** 60258 * centisome-position: ** 34.757076...")
(Created page with "Category:gene == Gene SJ16180 == * transcription-direction: ** positive * right-end-position: ** 201032 * left-end-position: ** 192550 * centisome-position: ** 67.21307...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22556 ==
+
== Gene SJ16180 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 66802
+
** 201032
 
* left-end-position:
 
* left-end-position:
−
** 60258
+
** 192550
 
* centisome-position:
 
* centisome-position:
−
** 34.757076    
+
** 67.21307    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DTDPDEHYDRHAMEPIM-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DTDPDEHYRHAMREDUCT-RXN]]
+
* [[6PGLUCONDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[OHACYL-COA-DEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10698]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10702]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10703]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11245]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11662]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12490]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12570]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12705]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12750]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16133]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17777]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17781]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17786]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17790]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17793]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17794]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17797]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17798]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-905]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9952]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-2044]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TSA-REDUCT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[DTDPRHAMSYN-PWY]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[VALDEG-PWY]]
−
* [[PWY-7301]]
+
** '''6''' reactions found over '''8''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[P122-PWY]]
−
* [[PWY-7814]]
+
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5136]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[FAO-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-391]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7007]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-735]]
 +
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6435]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7779]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5177]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7778]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6863]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[CENTFERM-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6583]]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6883]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[P162-PWY]]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7216]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7401]]
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-7094]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6946]]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6945]]
 +
** '''5''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6944]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-81]]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
** '''2''' reactions found over '''6''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[OXIDATIVEPENT-PWY]]
−
{{#set: right-end-position=66802}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=60258}}
+
* [[PWY0-321]]
−
{{#set: centisome-position=34.757076   }}
+
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-1361]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[GALACTARDEG-PWY]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCARDEG-PWY]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=201032}}
 +
{{#set: left-end-position=192550}}
 +
{{#set: centisome-position=67.21307   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=25}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=29}}

Latest revision as of 11:04, 18 March 2021

Gene SJ16180

  • transcription-direction:
    • positive
  • right-end-position:
    • 201032
  • left-end-position:
    • 192550
  • centisome-position:
    • 67.21307

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • VALDEG-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY66-391
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7007
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-6435
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-7779
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5177
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7778
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-6863
    • 9 reactions found over 11 reactions in the full pathway
  • CENTFERM-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6583
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-6883
    • 5 reactions found over 6 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-7216
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7401
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-7094
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6945
    • 5 reactions found over 17 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-81
    • 2 reactions found over 6 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-321
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-1361
    • 2 reactions found over 7 reactions in the full pathway
  • GALACTARDEG-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • GLUCARDEG-PWY
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16180&oldid=133468"