Difference between revisions of "SJ16215"

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(Created page with "Category:gene == Gene SJ12530 == * transcription-direction: ** negative * right-end-position: ** 109685 * left-end-position: ** 97896 * centisome-position: ** 27.365202...")
(Created page with "Category:gene == Gene SJ11934 == * transcription-direction: ** positive * right-end-position: ** 653534 * left-end-position: ** 640300 * centisome-position: ** 82.79959...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12530 ==
+
== Gene SJ11934 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 109685
+
** 653534
 
* left-end-position:
 
* left-end-position:
** 97896
+
** 640300
 
* centisome-position:
 
* centisome-position:
** 27.365202    
+
** 82.79959    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-15090]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
* [[TRIGLSYN-PWY]]
+
{{#set: right-end-position=653534}}
** '''5''' reactions found over '''7''' reactions in the full pathway
+
{{#set: left-end-position=640300}}
* [[PWY-7420]]
+
{{#set: centisome-position=82.79959   }}
** '''4''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=109685}}
 
{{#set: left-end-position=97896}}
 
{{#set: centisome-position=27.365202   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=2}}
 

Revision as of 11:11, 15 January 2021

Gene SJ11934

  • transcription-direction:
    • positive
  • right-end-position:
    • 653534
  • left-end-position:
    • 640300
  • centisome-position:
    • 82.79959

Organism(s) associated with this gene

Reaction(s) associated