Difference between revisions of "SJ16226"
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(Created page with "Category:gene == Gene SJ20297 == * transcription-direction: ** negative * right-end-position: ** 209221 * left-end-position: ** 193021 * centisome-position: ** 31.096857...") |
(Created page with "Category:gene == Gene SJ16226 == * transcription-direction: ** positive * right-end-position: ** 12493 * left-end-position: ** 8639 * centisome-position: ** 1.2526826...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ16226 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 12493 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 8639 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 1.2526826 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[SAMDECARB-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | == Pathway(s) associated == |
| + | * [[ARGSPECAT-PWY]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[BSUBPOLYAMSYN-PWY]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6834]] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=12493}} | ||
| + | {{#set: left-end-position=8639}} | ||
| + | {{#set: centisome-position=1.2526826 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=3}} | ||
Latest revision as of 11:06, 18 March 2021
Contents
Gene SJ16226
- transcription-direction:
- positive
- right-end-position:
- 12493
- left-end-position:
- 8639
- centisome-position:
- 1.2526826
Organism(s) associated with this gene
Reaction(s) associated
- SAMDECARB-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- ARGSPECAT-PWY
- 2 reactions found over 2 reactions in the full pathway
- BSUBPOLYAMSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-6834
- 2 reactions found over 4 reactions in the full pathway
