Difference between revisions of "SJ16242"

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(Created page with "Category:gene == Gene SJ11959 == * transcription-direction: ** positive * right-end-position: ** 58516 * left-end-position: ** 56742 * centisome-position: ** 15.647830...")
(Created page with "Category:gene == Gene SJ15379 == * transcription-direction: ** negative * right-end-position: ** 29947 * left-end-position: ** 11728 * centisome-position: ** 1.6641481...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ11959 ==
+
== Gene SJ15379 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 58516
+
** 29947
 
* left-end-position:
 
* left-end-position:
** 56742
+
** 11728
 
* centisome-position:
 
* centisome-position:
** 15.647830    
+
** 1.6641481    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[GLYOXI-RXN]]
+
* [[FORMYLTHFDEFORMYL-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GLYOXIII-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5386]]
+
* [[PWY-7909]]
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
{{#set: transcription-direction=positive}}
+
* [[P164-PWY]]
{{#set: right-end-position=58516}}
+
** '''6''' reactions found over '''17''' reactions in the full pathway
{{#set: left-end-position=56742}}
+
* [[PWY-5497]]
{{#set: centisome-position=15.647830   }}
+
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-2201]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=29947}}
 +
{{#set: left-end-position=11728}}
 +
{{#set: centisome-position=1.6641481   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}

Revision as of 18:43, 14 January 2021

Gene SJ15379

  • transcription-direction:
    • negative
  • right-end-position:
    • 29947
  • left-end-position:
    • 11728
  • centisome-position:
    • 1.6641481

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7909
    • 3 reactions found over 4 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 10 reactions in the full pathway