Difference between revisions of "SJ16326"

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(Created page with "Category:gene == Gene SJ04851 == * transcription-direction: ** negative * right-end-position: ** 12377 * left-end-position: ** 2540 * centisome-position: ** 2.564465 =...")
(Created page with "Category:gene == Gene SJ19186 == * transcription-direction: ** positive * right-end-position: ** 86457 * left-end-position: ** 67033 * centisome-position: ** 28.988495...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04851 ==
+
== Gene SJ19186 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 12377
+
** 86457
 
* left-end-position:
 
* left-end-position:
−
** 2540
+
** 67033
 
* centisome-position:
 
* centisome-position:
−
** 2.564465    
+
** 28.988495    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12720]]
+
* [[GLUTAMIDOTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[SULFATE-ADENYLYLTRANS-RXN]]
+
* [[GLUTAMIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PRIBFAICARPISOM-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[PRICI]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17900]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6932]]
+
* [[HISTSYN-PWY]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5278]]
+
* [[CITRULBIO-PWY]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
* [[DISSULFRED-PWY]]
+
* [[GLUTAMINDEG-PWY]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P224-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=86457}}
−
* [[PWY-6683]]
+
{{#set: left-end-position=67033}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=28.988495   }}
−
* [[SULFMETII-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5340]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=12377}}
 
−
{{#set: left-end-position=2540}}
 
−
{{#set: centisome-position=2.564465   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Revision as of 09:25, 27 August 2019

Gene SJ19186

  • transcription-direction:
    • positive
  • right-end-position:
    • 86457
  • left-end-position:
    • 67033
  • centisome-position:
    • 28.988495

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HISTSYN-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway




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