Difference between revisions of "SJ16345"
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(Created page with "Category:gene == Gene SJ07404 == * transcription-direction: ** positive * right-end-position: ** 42804 * left-end-position: ** 32984 * centisome-position: ** 48.594494...") |
(Created page with "Category:gene == Gene SJ10100 == * transcription-direction: ** positive * right-end-position: ** 371133 * left-end-position: ** 348566 * centisome-position: ** 87.54179...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10100 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 371133 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 348566 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 87.54179 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GBDP]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GDPPYPHOSKIN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[GTPPYPHOSKIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| + | * [[PPGPPSYN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-6427]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PPGPPMET-PWY]] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=371133}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=348566}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=87.54179 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated=1}} | + | {{#set: nb reaction associated=5}} |
| + | {{#set: nb pathway associated=1}} | ||
Revision as of 18:50, 14 January 2021
Contents
Gene SJ10100
- transcription-direction:
- positive
- right-end-position:
- 371133
- left-end-position:
- 348566
- centisome-position:
- 87.54179
Organism(s) associated with this gene
Reaction(s) associated
- GBDP
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- GDPPYPHOSKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GTPPYPHOSKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- PPGPPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-6427
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PPGPPMET-PWY
- 5 reactions found over 6 reactions in the full pathway
