Difference between revisions of "SJ16362"

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(Created page with "Category:gene == Gene SJ21874 == * transcription-direction: ** positive * right-end-position: ** 168590 * left-end-position: ** 148536 * centisome-position: ** 80.374016...")
(Created page with "Category:gene == Gene SJ16362 == * transcription-direction: ** positive * right-end-position: ** 259294 * left-end-position: ** 226821 * centisome-position: ** 79.79322...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21874 ==
+
== Gene SJ16362 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 168590
+
** 259294
 
* left-end-position:
 
* left-end-position:
−
** 148536
+
** 226821
 
* centisome-position:
 
* centisome-position:
−
** 80.374016    
+
** 79.79322    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
Line 19: Line 19:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PHOSPHOLIPASE-A1-RXN]]
+
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[LEUCINE--TRNA-LIGASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
* [[RXN-12252]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12430]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 40: Line 42:
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-6952]]
+
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXNQT-4366]]
+
* [[VALINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[LIPASYN-PWY]]
+
* [[TRNA-CHARGING-PWY]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-6803]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-6303]]
 
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
Line 57: Line 57:
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=168590}}
+
{{#set: right-end-position=259294}}
−
{{#set: left-end-position=148536}}
+
{{#set: left-end-position=226821}}
−
{{#set: centisome-position=80.374016   }}
+
{{#set: centisome-position=79.79322   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=11}}
 
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:05, 18 March 2021

Gene SJ16362

  • transcription-direction:
    • positive
  • right-end-position:
    • 259294
  • left-end-position:
    • 226821
  • centisome-position:
    • 79.79322

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




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