Difference between revisions of "SJ16371"

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(Created page with "Category:gene == Gene SJ11297 == * transcription-direction: ** negative * right-end-position: ** 440735 * left-end-position: ** 430484 * centisome-position: ** 54.939716...")
(Created page with "Category:gene == Gene SJ04504 == * transcription-direction: ** negative * right-end-position: ** 420260 * left-end-position: ** 397738 * centisome-position: ** 77.96308...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11297 ==
+
== Gene SJ04504 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 440735
+
** 420260
 
* left-end-position:
 
* left-end-position:
−
** 430484
+
** 397738
 
* centisome-position:
 
* centisome-position:
−
** 54.939716    
+
** 77.96308    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11754]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14177]]
+
* [[RXN-12195]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9227]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9235]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9242]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN3O-54]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
−
* [[PWY-6708]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-5870]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-5855]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[PWY-5873]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5857]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5872]]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5856]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5871]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7230]]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7233]]
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY3O-19]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=440735}}
+
{{#set: right-end-position=420260}}
−
{{#set: left-end-position=430484}}
+
{{#set: left-end-position=397738}}
−
{{#set: centisome-position=54.939716   }}
+
{{#set: centisome-position=77.96308   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:08, 15 January 2021

Gene SJ04504

  • transcription-direction:
    • negative
  • right-end-position:
    • 420260
  • left-end-position:
    • 397738
  • centisome-position:
    • 77.96308

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16371&oldid=108497"