Difference between revisions of "SJ16431"

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(Created page with "Category:gene == Gene SJ21166 == * transcription-direction: ** positive * right-end-position: ** 53717 * left-end-position: ** 40175 * centisome-position: ** 20.351768...")
(Created page with "Category:gene == Gene SJ13715 == * transcription-direction: ** negative * right-end-position: ** 1015288 * left-end-position: ** 990437 * centisome-position: ** 74.73846...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21166 ==
+
== Gene SJ13715 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 53717
+
** 1015288
 
* left-end-position:
 
* left-end-position:
−
** 40175
+
** 990437
 
* centisome-position:
 
* centisome-position:
−
** 20.351768    
+
** 74.73846    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTIDINE--TRNA-LIGASE-RXN]]
+
* [[1.10.2.2-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[3.4.24.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14107]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15816]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15829]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-3781]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7279]]
−
{{#set: right-end-position=53717}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=40175}}
+
* [[PWY-7082]]
−
{{#set: centisome-position=20.351768   }}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6692]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=1015288}}
 +
{{#set: left-end-position=990437}}
 +
{{#set: centisome-position=74.73846   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}

Revision as of 18:50, 14 January 2021

Gene SJ13715

  • transcription-direction:
    • negative
  • right-end-position:
    • 1015288
  • left-end-position:
    • 990437
  • centisome-position:
    • 74.73846

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7082
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6692
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16431&oldid=96668"