Difference between revisions of "SJ16434"
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(Created page with "Category:gene == Gene SJ13207 == * transcription-direction: ** positive * right-end-position: ** 341187 * left-end-position: ** 336053 * centisome-position: ** 97.48522...") |
(Created page with "Category:gene == Gene SJ16434 == * transcription-direction: ** negative * right-end-position: ** 593082 * left-end-position: ** 581097 * centisome-position: ** 84.487686...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ16434 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 593082 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 581097 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 84.487686 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[AGMATINE-DEIMINASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | + | * [[PROTEIN-ARGININE-DEIMINASE-RXN]] | |
| − | *** source: [[ | ||
| − | |||
| − | |||
| − | *** source: [[ | ||
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[ARGDEG-III-PWY]] |
| − | + | ** '''3''' reactions found over '''3''' reactions in the full pathway | |
| − | + | * [[PWY-43]] | |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-4921]] |
| − | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | * [[PWY- | + | {{#set: transcription-direction=negative}} |
| − | ** ''' | + | {{#set: right-end-position=593082}} |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=581097}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=84.487686 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:06, 18 March 2021
Contents
Gene SJ16434
- transcription-direction:
- negative
- right-end-position:
- 593082
- left-end-position:
- 581097
- centisome-position:
- 84.487686
Organism(s) associated with this gene
Reaction(s) associated
- AGMATINE-DEIMINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PROTEIN-ARGININE-DEIMINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- ARGDEG-III-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-43
- 3 reactions found over 3 reactions in the full pathway
- PWY-4921
- 1 reactions found over 1 reactions in the full pathway
