Difference between revisions of "SJ16458"

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(Created page with "Category:gene == Gene SJ20639 == * transcription-direction: ** positive * right-end-position: ** 389712 * left-end-position: ** 377072 * centisome-position: ** 61.156994...")
(Created page with "Category:gene == Gene SJ16458 == * transcription-direction: ** negative * right-end-position: ** 80170 * left-end-position: ** 60461 * centisome-position: ** 21.410763...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20639 ==
+
== Gene SJ16458 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 389712
+
** 80170
 
* left-end-position:
 
* left-end-position:
−
** 377072
+
** 60461
 
* centisome-position:
 
* centisome-position:
−
** 61.156994    
+
** 21.410763    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARGSUCCINLYA-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[GLYCPDIESTER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-22]]
+
* [[RXN-14073]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14136]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14160]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ARGSYN-PWY]]
+
* [[PWY-6952]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-4983]]
+
* [[PWY-7409]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7400]]
+
{{#set: transcription-direction=negative}}
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=80170}}
−
* [[PWY-4984]]
+
{{#set: left-end-position=60461}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=21.410763   }}
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5154]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=389712}}
 
−
{{#set: left-end-position=377072}}
 
−
{{#set: centisome-position=61.156994   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:06, 18 March 2021

Gene SJ16458

  • transcription-direction:
    • negative
  • right-end-position:
    • 80170
  • left-end-position:
    • 60461
  • centisome-position:
    • 21.410763

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6952
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7409
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16458&oldid=134396"