Difference between revisions of "SJ16496"
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(Created page with "Category:gene == Gene SJ15629 == * transcription-direction: ** positive * right-end-position: ** 173239 * left-end-position: ** 165127 * centisome-position: ** 56.331192...") |
(Created page with "Category:gene == Gene SJ07221 == * transcription-direction: ** negative * right-end-position: ** 1020521 * left-end-position: ** 998167 * centisome-position: ** 68.31725...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07221 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 1020521 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 998167 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 68.31725 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[HISTIDINE--TRNA-LIGASE-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[HISTIDINE-AMMONIA-LYASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY | + | * [[TRNA-CHARGING-PWY]] |
− | ** ''' | + | ** '''21''' reactions found over '''21''' reactions in the full pathway |
− | * [[PWY | + | * [[HISDEG-PWY]] |
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-5028]] |
− | ** ''' | + | ** '''1''' reactions found over '''5''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5030]] |
− | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
− | * [[ | + | * [[HISHP-PWY]] |
− | + | ** '''1''' reactions found over '''8''' reactions in the full pathway | |
− | + | {{#set: transcription-direction=negative}} | |
− | ** '''1''' reactions found over ''' | + | {{#set: right-end-position=1020521}} |
− | {{#set: transcription-direction= | + | {{#set: left-end-position=998167}} |
− | {{#set: right-end-position= | + | {{#set: centisome-position=68.31725 }} |
− | {{#set: left-end-position= | ||
− | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 11:05, 15 January 2021
Contents
Gene SJ07221
- transcription-direction:
- negative
- right-end-position:
- 1020521
- left-end-position:
- 998167
- centisome-position:
- 68.31725
Organism(s) associated with this gene
Reaction(s) associated
- HISTIDINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HISTIDINE-AMMONIA-LYASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
- HISDEG-PWY
- 1 reactions found over 4 reactions in the full pathway
- PWY-5028
- 1 reactions found over 5 reactions in the full pathway
- PWY-5030
- 3 reactions found over 6 reactions in the full pathway
- HISHP-PWY
- 1 reactions found over 8 reactions in the full pathway