Difference between revisions of "SJ16496"

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(Created page with "Category:gene == Gene SJ07221 == * transcription-direction: ** negative * right-end-position: ** 1020521 * left-end-position: ** 998167 * centisome-position: ** 68.31725...")
(Created page with "Category:gene == Gene SJ15629 == * transcription-direction: ** positive * right-end-position: ** 173239 * left-end-position: ** 165127 * centisome-position: ** 56.331192...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07221 ==
+
== Gene SJ15629 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 1020521
+
** 173239
 
* left-end-position:
 
* left-end-position:
−
** 998167
+
** 165127
 
* centisome-position:
 
* centisome-position:
−
** 68.31725    
+
** 56.331192    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTIDINE--TRNA-LIGASE-RXN]]
+
* [[PEROXID-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HISTIDINE-AMMONIA-LYASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRNA-CHARGING-PWY]]
+
* [[PWY-7214]]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[HISDEG-PWY]]
+
* [[PWY-7445]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5028]]
+
* [[PWY-5466]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5030]]
+
* [[PWY-6824]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[HISHP-PWY]]
+
* [[PWY-5469]]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5461]]
−
{{#set: right-end-position=1020521}}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: left-end-position=998167}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=68.31725   }}
+
{{#set: right-end-position=173239}}
 +
{{#set: left-end-position=165127}}
 +
{{#set: centisome-position=56.331192   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=6}}

Revision as of 18:45, 14 January 2021

Gene SJ15629

  • transcription-direction:
    • positive
  • right-end-position:
    • 173239
  • left-end-position:
    • 165127
  • centisome-position:
    • 56.331192

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16496&oldid=94191"