Difference between revisions of "SJ16555"
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(Created page with "Category:gene == Gene SJ16555 == * transcription-direction: ** positive * right-end-position: ** 83100 * left-end-position: ** 75714 * centisome-position: ** 26.990301...") |
(Created page with "Category:gene == Gene SJ19972 == * transcription-direction: ** negative * right-end-position: ** 28762 * left-end-position: ** 18245 * centisome-position: ** 8.423517...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19972 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 28762 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 18245 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 8.423517 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[1.8.4.8-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[1.8.4.9-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-12019]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | * [[SO4ASSIM-PWY]] |
| − | {{#set: left-end-position= | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[SULFMETII-PWY]] |
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-6683]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=28762}} | ||
| + | {{#set: left-end-position=18245}} | ||
| + | {{#set: centisome-position=8.423517 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=3}} | ||
Revision as of 18:51, 14 January 2021
Contents
Gene SJ19972
- transcription-direction:
- negative
- right-end-position:
- 28762
- left-end-position:
- 18245
- centisome-position:
- 8.423517
Organism(s) associated with this gene
Reaction(s) associated
- 1.8.4.8-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 1.8.4.9-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RXN-12019
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- SO4ASSIM-PWY
- 3 reactions found over 2 reactions in the full pathway
- SULFMETII-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-6683
- 3 reactions found over 3 reactions in the full pathway
