Difference between revisions of "SJ16573"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19151 CPD-19151] == * common-name: ** (s)-3-hydroxy-(5z)-dodecenoyl-coa * smiles: ** cccccc...")
(Created page with "Category:gene == Gene SJ16573 == * transcription-direction: ** negative * right-end-position: ** 73954 * left-end-position: ** 62145 * centisome-position: ** 22.2392 =...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19151 CPD-19151] ==
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== Gene SJ16573 ==
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* common-name:
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* transcription-direction:
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** (s)-3-hydroxy-(5z)-dodecenoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccccccc=ccc(o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 73954
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* inchi-key:
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* left-end-position:
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** ayordfmyybnsbo-qccsjadrsa-j
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** 62145
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* molecular-weight:
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* centisome-position:
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** 959.791
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** 22.2392   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-17798]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17797]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[3.4.11.18-RXN]]
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{{#set: common-name=(s)-3-hydroxy-(5z)-dodecenoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=ayordfmyybnsbo-qccsjadrsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=959.791}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17873]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17874]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17875]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17876]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17877]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17878]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-7800]]
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** '''6''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-7799]]
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** '''7''' reactions found over '''14''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=73954}}
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{{#set: left-end-position=62145}}
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{{#set: centisome-position=22.2392    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=7}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:00, 18 March 2021

Gene SJ16573

  • transcription-direction:
    • negative
  • right-end-position:
    • 73954
  • left-end-position:
    • 62145
  • centisome-position:
    • 22.2392

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7800
    • 6 reactions found over 21 reactions in the full pathway
  • PWY-7799
    • 7 reactions found over 14 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16573&oldid=131713"