Difference between revisions of "SJ16608"

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(Created page with "Category:gene == Gene SJ17484 == * transcription-direction: ** negative * right-end-position: ** 53187 * left-end-position: ** 44448 * centisome-position: ** 16.981218...")
(Created page with "Category:gene == Gene SJ16608 == * transcription-direction: ** positive * right-end-position: ** 451852 * left-end-position: ** 445935 * centisome-position: ** 65.25003...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17484 ==
+
== Gene SJ16608 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 53187
+
** 451852
 
* left-end-position:
 
* left-end-position:
−
** 44448
+
** 445935
 
* centisome-position:
 
* centisome-position:
−
** 16.981218    
+
** 65.25003    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[FUMARATE-REDUCTASE-NADH-RXN]]
+
* [[RXN-15212]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SPHINGOMYELIN-PHOSPHODIESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14971]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15378]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY3DJ-11281]]
−
* [[PWY-6969]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''10''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7277]]
−
* [[PWY-5690]]
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[P105-PWY]]
+
{{#set: right-end-position=451852}}
−
** '''10''' reactions found over '''9''' reactions in the full pathway
+
{{#set: left-end-position=445935}}
−
* [[TCA]]
+
{{#set: centisome-position=65.25003   }}
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7254]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-561]]
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-3781]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7279]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1353]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY66-398]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-4302]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY0-1329]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=53187}}
 
−
{{#set: left-end-position=44448}}
 
−
{{#set: centisome-position=16.981218   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:10, 18 March 2021

Gene SJ16608

  • transcription-direction:
    • positive
  • right-end-position:
    • 451852
  • left-end-position:
    • 445935
  • centisome-position:
    • 65.25003

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY3DJ-11281
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7277
    • 4 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16608&oldid=136245"