Difference between revisions of "SJ16634"

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(Created page with "Category:gene == Gene SJ15530 == * transcription-direction: ** positive * right-end-position: ** 154379 * left-end-position: ** 143447 * centisome-position: ** 48.79 =...")
 
(Created page with "Category:gene == Gene SJ16634 == * transcription-direction: ** negative * right-end-position: ** 189331 * left-end-position: ** 170828 * centisome-position: ** 61.298763...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15530 ==
+
== Gene SJ16634 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 154379
+
** 189331
 
* left-end-position:
 
* left-end-position:
−
** 143447
+
** 170828
 
* centisome-position:
 
* centisome-position:
−
** 48.79    
+
** 61.298763    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLYOHMETRANS-RXN]]
+
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1321]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13395]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8497]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8647]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY66-375]]
−
* [[1CMET2-PWY]]
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-5410]]
−
* [[PWY-5497]]
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
* [[PWY-735]]
−
* [[PWY-181]]
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY66-392]]
−
* [[PWY-3661]]
+
** '''1''' reactions found over '''11''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-6917]]
−
* [[PWY-2201]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-5406]]
−
* [[GLYSYN-PWY]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[PWY-5407]]
−
* [[PWY-3661-1]]
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-5408]]
−
* [[PWY-1622]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''6''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-3841]]
+
{{#set: right-end-position=189331}}
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
{{#set: left-end-position=170828}}
−
* [[PWY-2161]]
+
{{#set: centisome-position=61.298763   }}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=154379}}
 
−
{{#set: left-end-position=143447}}
 
−
{{#set: centisome-position=48.79   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=8}}

Latest revision as of 11:08, 18 March 2021

Gene SJ16634

  • transcription-direction:
    • negative
  • right-end-position:
    • 189331
  • left-end-position:
    • 170828
  • centisome-position:
    • 61.298763

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-375
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5410
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY66-392
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-6917
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5408
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16634&oldid=135382"