Difference between revisions of "SJ16682"

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(Created page with "Category:gene == Gene SJ18127 == * transcription-direction: ** positive * right-end-position: ** 37660 * left-end-position: ** 29240 * centisome-position: ** 11.604141...")
(Created page with "Category:gene == Gene SJ11598 == * transcription-direction: ** negative * right-end-position: ** 369886 * left-end-position: ** 337224 * centisome-position: ** 91.12020...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18127 ==
+
== Gene SJ11598 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 37660
+
** 369886
 
* left-end-position:
 
* left-end-position:
−
** 29240
+
** 337224
 
* centisome-position:
 
* centisome-position:
−
** 11.604141    
+
** 91.12020    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
−
* [[GPPSYN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11056]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11057]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13064]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15029]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17334]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17335]]
+
* [[RXN-11135]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17625]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17627]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-8630]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-8872]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-146]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-161]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-163]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-169]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-181]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
−
* [[PWY-6383]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY-7410]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-7102]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[PWY-6859]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7736]]
+
{{#set: right-end-position=369886}}
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
{{#set: left-end-position=337224}}
−
* [[PWY-5122]]
+
{{#set: centisome-position=91.12020   }}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7141]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6398]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6992]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7407]]
 
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5451]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7466]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5665]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7826]]
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY66-201]]
 
−
** '''3''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY66-221]]
 
−
** '''5''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-241]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=37660}}
 
−
{{#set: left-end-position=29240}}
 
−
{{#set: centisome-position=11.604141   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=17}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=21}}
+
{{#set: nb pathway associated=4}}

Revision as of 15:21, 5 January 2021

Gene SJ11598

  • transcription-direction:
    • negative
  • right-end-position:
    • 369886
  • left-end-position:
    • 337224
  • centisome-position:
    • 91.12020

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16682&oldid=70011"