Difference between revisions of "SJ16689"

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(Created page with "Category:gene == Gene SJ07890 == * transcription-direction: ** negative * right-end-position: ** 27356 * left-end-position: ** 1069 * centisome-position: ** 1.7597576...")
(Created page with "Category:gene == Gene SJ20499 == * transcription-direction: ** positive * right-end-position: ** 124407 * left-end-position: ** 118532 * centisome-position: ** 19.179222...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ07890 ==
+
== Gene SJ20499 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 27356
+
** 124407
 
* left-end-position:
 
* left-end-position:
** 1069
+
** 118532
 
* centisome-position:
 
* centisome-position:
** 1.7597576    
+
** 19.179222    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[6.1.1.24-RXN]]
+
* [[RXN-11834]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GLURS-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-9386]]
+
{{#set: transcription-direction=positive}}
** Category: [[orthology]]
+
{{#set: right-end-position=124407}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=118532}}
== Pathway(s) associated ==
+
{{#set: centisome-position=19.179222   }}
* [[PWY-5188]]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
* [[TRNA-CHARGING-PWY]]
 
** '''21''' reactions found over '''21''' reactions in the full pathway
 
* [[PWY-5921]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=27356}}
 
{{#set: left-end-position=1069}}
 
{{#set: centisome-position=1.7597576   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=3}}
 

Revision as of 11:08, 15 January 2021

Gene SJ20499

  • transcription-direction:
    • positive
  • right-end-position:
    • 124407
  • left-end-position:
    • 118532
  • centisome-position:
    • 19.179222

Organism(s) associated with this gene

Reaction(s) associated