Difference between revisions of "SJ16689"

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(Created page with "Category:gene == Gene SJ02830 == * transcription-direction: ** negative * right-end-position: ** 160507 * left-end-position: ** 153349 * centisome-position: ** 28.769245...")
(Created page with "Category:gene == Gene SJ16689 == * transcription-direction: ** positive * right-end-position: ** 59056 * left-end-position: ** 46274 * centisome-position: ** 16.65557...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ02830 ==
+
== Gene SJ16689 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 160507
+
** 59056
 
* left-end-position:
 
* left-end-position:
** 153349
+
** 46274
 
* centisome-position:
 
* centisome-position:
** 28.769245    
+
** 16.65557    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.7.8.23-RXN]]
+
* [[URACIL-PRIBOSYLTRANS-RXN]]
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[23-DIMETHYLMALATE-LYASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ISOCIT-CLEAV-RXN]]
+
* [[URIDINEKIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[URKI-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-10827]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-10828]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5055]]
+
* [[PWY-7183]]
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
* [[P105-PWY]]
+
* [[PWY-7193]]
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-6969]]
+
{{#set: transcription-direction=positive}}
** '''10''' reactions found over '''12''' reactions in the full pathway
+
{{#set: right-end-position=59056}}
* [[GLYOXYLATE-BYPASS]]
+
{{#set: left-end-position=46274}}
** '''6''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=16.65557   }}
* [[PWY-7769]]
 
** '''2''' reactions found over '''25''' reactions in the full pathway
 
* [[PWY-6322]]
 
** '''2''' reactions found over '''25''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=160507}}
 
{{#set: left-end-position=153349}}
 
{{#set: centisome-position=28.769245   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:06, 18 March 2021

Gene SJ16689

  • transcription-direction:
    • positive
  • right-end-position:
    • 59056
  • left-end-position:
    • 46274
  • centisome-position:
    • 16.65557

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7183
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7193
    • 2 reactions found over 3 reactions in the full pathway