Difference between revisions of "SJ16689"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ13098 == * transcription-direction: ** negative * right-end-position: ** 30548 * left-end-position: ** 12458 * centisome-position: ** 3.60364 =...")
 
(Created page with "Category:gene == Gene SJ02318 == * transcription-direction: ** negative * right-end-position: ** 74010 * left-end-position: ** 54101 * centisome-position: ** 39.110382...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13098 ==
+
== Gene SJ02318 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 30548
+
** 74010
 
* left-end-position:
 
* left-end-position:
−
** 12458
+
** 54101
 
* centisome-position:
 
* centisome-position:
−
** 3.60364    
+
** 39.110382    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PEROXID-RXN]]
−
* [[RXN-11519]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11520]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11521]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12615]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7682]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-15288]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-901]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-17352]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[XANDH]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-8635]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[XANTHINE-OXIDASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[XNDH]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7214]]
−
* [[PWY-6632]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[PWY-6596]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-5466]]
−
* [[P164-PWY]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''6''' reactions found over '''17''' reactions in the full pathway
+
* [[PWY-6824]]
−
* [[SALVADEHYPOX-PWY]]
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5469]]
−
* [[PWY-5497]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
* [[PWY-5461]]
−
* [[PWY-6606]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6607]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6999]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6608]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6538]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5695]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=30548}}
+
{{#set: right-end-position=74010}}
−
{{#set: left-end-position=12458}}
+
{{#set: left-end-position=54101}}
−
{{#set: centisome-position=3.60364   }}
+
{{#set: centisome-position=39.110382   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=6}}

Revision as of 14:21, 26 August 2019

Gene SJ02318

  • transcription-direction:
    • negative
  • right-end-position:
    • 74010
  • left-end-position:
    • 54101
  • centisome-position:
    • 39.110382

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16689&oldid=17331"