Difference between revisions of "SJ16853"

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(Created page with "Category:gene == Gene SJ09366 == * transcription-direction: ** positive * right-end-position: ** 423506 * left-end-position: ** 411196 * centisome-position: ** 50.10571...")
(Created page with "Category:gene == Gene SJ16853 == * transcription-direction: ** positive * right-end-position: ** 4352 * left-end-position: ** 1952 * centisome-position: ** 41.224922 =...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09366 ==
+
== Gene SJ16853 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 423506
+
** 4352
 
* left-end-position:
 
* left-end-position:
−
** 411196
+
** 1952
 
* centisome-position:
 
* centisome-position:
−
** 50.10571    
+
** 41.224922    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ACETYLGLUTKIN-RXN]]
+
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[CARBOXYLESTERASE-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[AGK]]
+
* [[LYSOPHOSPHOLIPASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ASPARTATEKIN-RXN]]
+
* [[PHOSPHOLIPASE-A2-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUTKIN-RXN]]
+
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12002]]
+
* [[RXN-10711]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15005]]
+
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15035]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15065]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15067]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15068]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16138]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16139]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17735]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17736]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-6725]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[GLUTORN-PWY]]
+
* [[PWY-6803]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[LIPASYN-PWY]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]]
+
* [[PWY-6303]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5154]]
+
* [[PWY-6857]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5097]]
+
* [[PWY-7409]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6559]]
+
* [[PWY-7416]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[P101-PWY]]
+
* [[PWY-7417]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[DAPLYSINESYN-PWY]]
+
* [[PWY66-397]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-2941]]
+
* [[PWY66-395]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-2942]]
+
* [[PWY66-394]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6562]]
+
* [[PWY-7783]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7153]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6922]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ARGININE-SYN4-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3341]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PROSYN-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7176]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7400]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
</div>
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=423506}}
+
{{#set: right-end-position=4352}}
−
{{#set: left-end-position=411196}}
+
{{#set: left-end-position=1952}}
−
{{#set: centisome-position=50.10571   }}
+
{{#set: centisome-position=41.224922   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=19}}
−
{{#set: nb pathway associated=19}}
+
{{#set: nb pathway associated=11}}

Latest revision as of 11:10, 18 March 2021

Gene SJ16853

  • transcription-direction:
    • positive
  • right-end-position:
    • 4352
  • left-end-position:
    • 1952
  • centisome-position:
    • 41.224922

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6803
    • 4 reactions found over 4 reactions in the full pathway
  • LIPASYN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7409
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7416
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7417
    • 2 reactions found over 2 reactions in the full pathway
  • PWY66-397
    • 1 reactions found over 11 reactions in the full pathway
  • PWY66-395
    • 1 reactions found over 10 reactions in the full pathway
  • PWY66-394
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7783
    • 2 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16853&oldid=136291"