Difference between revisions of "SJ16853"

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(Created page with "Category:gene == Gene SJ07116 == * transcription-direction: ** negative * right-end-position: ** 235562 * left-end-position: ** 224574 * centisome-position: ** 48.365795...")
(Created page with "Category:gene == Gene SJ09366 == * transcription-direction: ** positive * right-end-position: ** 423506 * left-end-position: ** 411196 * centisome-position: ** 50.10571...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07116 ==
+
== Gene SJ09366 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 235562
+
** 423506
 
* left-end-position:
 
* left-end-position:
−
** 224574
+
** 411196
 
* centisome-position:
 
* centisome-position:
−
** 48.365795    
+
** 50.10571    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ACETYLGLUTKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12195]]
+
* [[AGK]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12196]]
+
* [[ASPARTATEKIN-RXN]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[GLUTKIN-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12002]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15005]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[GLUTORN-PWY]]
−
* [[PWY-7198]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[ARGSYNBSUB-PWY]]
−
* [[PWY-7184]]
 
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-5154]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-5097]]
−
{{#set: right-end-position=235562}}
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=224574}}
+
* [[PWY-6559]]
−
{{#set: centisome-position=48.365795   }}
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P101-PWY]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2941]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2942]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6562]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7153]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[HOMOSERSYN-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6922]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[ARGININE-SYN4-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3341]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PROSYN-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7176]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7400]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=423506}}
 +
{{#set: left-end-position=411196}}
 +
{{#set: centisome-position=50.10571   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=19}}

Revision as of 09:27, 27 August 2019

Gene SJ09366

  • transcription-direction:
    • positive
  • right-end-position:
    • 423506
  • left-end-position:
    • 411196
  • centisome-position:
    • 50.10571

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6559
    • 2 reactions found over 4 reactions in the full pathway
  • P101-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7153
    • 4 reactions found over 8 reactions in the full pathway
  • HOMOSERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922
    • 5 reactions found over 7 reactions in the full pathway
  • ARGININE-SYN4-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 5 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7176
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16853&oldid=32115"