Difference between revisions of "SJ16864"

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(Created page with "Category:gene == Gene SJ04385 == * transcription-direction: ** positive * right-end-position: ** 72247 * left-end-position: ** 68570 * centisome-position: ** 63.592606...")
(Created page with "Category:gene == Gene SJ16864 == * transcription-direction: ** positive * right-end-position: ** 191161 * left-end-position: ** 184418 * centisome-position: ** 66.86609...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04385 ==
+
== Gene SJ16864 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 72247
+
** 191161
 
* left-end-position:
 
* left-end-position:
−
** 68570
+
** 184418
 
* centisome-position:
 
* centisome-position:
−
** 63.592606    
+
** 66.86609    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[1.1.1.145-RXN]]
+
* [[2-OCTAPRENYL-6-OHPHENOL-METHY-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12693]]
+
* [[2.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12747]]
+
* [[DHHB-METHYLTRANSFER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12789]]
+
* [[RXN-11758]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN66-342]]
+
* [[RXN-12160]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN66-350]]
+
* [[RXN-9225]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN66-353]]
+
* [[RXN-9229]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
+
* [[RXN-9233]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9237]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN3O-102]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6946]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
* [[PWY-6708]]
−
* [[PWY-6944]]
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
* [[PWY-5856]]
−
* [[PWY-6948]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''2''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-5871]]
−
* [[PWY66-378]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-5870]]
−
* [[PWY-7299]]
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-5855]]
−
* [[PWY-4861]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[PWY-5873]]
−
* [[PWY-6415]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-5857]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5872]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY3O-19]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7233]]
 +
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-7230]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=72247}}
+
{{#set: right-end-position=191161}}
−
{{#set: left-end-position=68570}}
+
{{#set: left-end-position=184418}}
−
{{#set: centisome-position=63.592606   }}
+
{{#set: centisome-position=66.86609   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=11}}

Latest revision as of 11:10, 18 March 2021

Gene SJ16864

  • transcription-direction:
    • positive
  • right-end-position:
    • 191161
  • left-end-position:
    • 184418
  • centisome-position:
    • 66.86609

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5856
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5871
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5870
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5855
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872
    • 3 reactions found over 9 reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7233
    • 3 reactions found over n.a reactions in the full pathway
  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16864&oldid=136355"