Difference between revisions of "SJ16864"

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(Created page with "Category:gene == Gene SJ03226 == * transcription-direction: ** positive * right-end-position: ** 188306 * left-end-position: ** 138541 * centisome-position: ** 26.23187...")
(Created page with "Category:gene == Gene SJ07706 == * transcription-direction: ** positive * right-end-position: ** 42505 * left-end-position: ** 7827 * centisome-position: ** 12.470127...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ03226 ==
+
== Gene SJ07706 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 188306
+
** 42505
 
* left-end-position:
 
* left-end-position:
** 138541
+
** 7827
 
* centisome-position:
 
* centisome-position:
** 26.23187    
+
** 12.470127    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[HOMOCYSMET-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[HOMOCYSMETB12-RXN]]
+
* [[RXN-8443]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5041]]
+
* [[PWY-5381]]
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''11''' reactions in the full pathway
* [[HSERMETANA-PWY]]
 
** '''3''' reactions found over '''2''' reactions in the full pathway
 
* [[HOMOSER-METSYN-PWY]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6151]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-702]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-3841]]
 
** '''9''' reactions found over '''11''' reactions in the full pathway
 
* [[1CMET2-PWY]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[ADENOSYLHOMOCYSCAT-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-2201]]
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=188306}}
+
{{#set: right-end-position=42505}}
{{#set: left-end-position=138541}}
+
{{#set: left-end-position=7827}}
{{#set: centisome-position=26.23187   }}
+
{{#set: centisome-position=12.470127   }}
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=1}}

Revision as of 20:29, 18 December 2020

Gene SJ07706

  • transcription-direction:
    • positive
  • right-end-position:
    • 42505
  • left-end-position:
    • 7827
  • centisome-position:
    • 12.470127

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway