Difference between revisions of "SJ16882"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-710 CPD-710] == * common-name: ** campestanol * smiles: ** cc(c)c(c)ccc(c)[ch]3(cc[ch]4([ch...")
(Created page with "Category:gene == Gene SJ16882 == * transcription-direction: ** positive * right-end-position: ** 241752 * left-end-position: ** 234335 * centisome-position: ** 84.99514...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-710 CPD-710] ==
+
== Gene SJ16882 ==
−
* common-name:
+
* transcription-direction:
−
** campestanol
+
** positive
−
* smiles:
+
* right-end-position:
−
** cc(c)c(c)ccc(c)[ch]3(cc[ch]4([ch]2(cc[ch]1(cc(o)ccc(c)1[ch]2ccc(c)34))))
+
** 241752
−
* inchi-key:
+
* left-end-position:
−
** arytxmneanmlmu-atedbjntsa-n
+
** 234335
−
* molecular-weight:
+
* centisome-position:
−
** 402.702
+
** 84.99514   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-773]]
+
* [[S.japonica_carotenoid_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=campestanol}}
+
* [[GSHTRAN-RXN]]
−
{{#set: inchi-key=inchikey=arytxmneanmlmu-atedbjntsa-n}}
+
** Category: [[annotation]]
−
{{#set: molecular-weight=402.702}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GST-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13673]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15680]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6842]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4061]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY66-374]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7112]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7533]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=241752}}
 +
{{#set: left-end-position=234335}}
 +
{{#set: centisome-position=84.99514    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=5}}

Latest revision as of 11:04, 18 March 2021

Gene SJ16882

  • transcription-direction:
    • positive
  • right-end-position:
    • 241752
  • left-end-position:
    • 234335
  • centisome-position:
    • 84.99514

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16882&oldid=133466"