Difference between revisions of "SJ16882"
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(Created page with "Category:gene == Gene SJ17249 == * transcription-direction: ** negative * right-end-position: ** 48135 * left-end-position: ** 36987 * centisome-position: ** 5.460738...") |
(Created page with "Category:gene == Gene SJ16882 == * transcription-direction: ** positive * right-end-position: ** 241752 * left-end-position: ** 234335 * centisome-position: ** 84.99514...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ16882 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 241752 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 234335 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 84.99514 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * [[ | + | * [[GSHTRAN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[GST-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[PROSTAGLANDIN-D-SYNTHASE-RXN]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-13673]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-15680]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | + | * [[PWY-6842]] | |
− | * [[PWY- | + | ** '''5''' reactions found over '''9''' reactions in the full pathway |
− | + | * [[PWY-4061]] | |
− | + | ** '''4''' reactions found over '''8''' reactions in the full pathway | |
− | + | * [[PWY66-374]] | |
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− | ** | ||
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− | * [[PWY- | ||
− | ** '''4''' reactions found over | ||
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− | * [[ | ||
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** '''2''' reactions found over '''7''' reactions in the full pathway | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-7112]] |
− | + | ** '''3''' reactions found over '''4''' reactions in the full pathway | |
− | + | * [[PWY-7533]] | |
− | + | ** '''3''' reactions found over '''9''' reactions in the full pathway | |
− | + | {{#set: transcription-direction=positive}} | |
− | + | {{#set: right-end-position=241752}} | |
− | + | {{#set: left-end-position=234335}} | |
− | + | {{#set: centisome-position=84.99514 }} | |
− | + | {{#set: organism associated=S.japonica_carotenoid_curated}} | |
− | + | {{#set: nb reaction associated=5}} | |
− | + | {{#set: nb pathway associated=5}} | |
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− | ** '''3''' reactions found over | ||
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− | * [[PWY- | ||
− | ** '''3''' reactions found over ''' | ||
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− | {{#set: transcription-direction= | ||
− | {{#set: right-end-position= | ||
− | {{#set: left-end-position= | ||
− | {{#set: centisome-position= | ||
− | {{#set: organism associated=S. | ||
− | {{#set: nb reaction associated= | ||
− | {{#set: nb pathway associated= |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ16882
- transcription-direction:
- positive
- right-end-position:
- 241752
- left-end-position:
- 234335
- centisome-position:
- 84.99514
Organism(s) associated with this gene
Reaction(s) associated
- GSHTRAN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- GST-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PROSTAGLANDIN-D-SYNTHASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13673
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-15680
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6842
- 5 reactions found over 9 reactions in the full pathway
- PWY-4061
- 4 reactions found over 8 reactions in the full pathway
- PWY66-374
- 2 reactions found over 7 reactions in the full pathway
- PWY-7112
- 3 reactions found over 4 reactions in the full pathway
- PWY-7533
- 3 reactions found over 9 reactions in the full pathway