Difference between revisions of "SJ16882"

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(Created page with "Category:gene == Gene SJ08269 == * transcription-direction: ** positive * right-end-position: ** 217758 * left-end-position: ** 190549 * centisome-position: ** 42.93994...")
(Created page with "Category:gene == Gene SJ16882 == * transcription-direction: ** positive * right-end-position: ** 241752 * left-end-position: ** 234335 * centisome-position: ** 84.99514...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08269 ==
+
== Gene SJ16882 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 217758
+
** 241752
 
* left-end-position:
 
* left-end-position:
−
** 190549
+
** 234335
 
* centisome-position:
 
* centisome-position:
−
** 42.93994    
+
** 84.99514    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ATPASE-RXN]]
+
* [[GSHTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GST-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-13673]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15680]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8443]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-6842]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-4061]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY66-374]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7112]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5381]]
+
* [[PWY-7533]]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=217758}}
+
{{#set: right-end-position=241752}}
−
{{#set: left-end-position=190549}}
+
{{#set: left-end-position=234335}}
−
{{#set: centisome-position=42.93994   }}
+
{{#set: centisome-position=84.99514   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=5}}
 
{{#set: nb pathway associated=5}}
 
{{#set: nb pathway associated=5}}

Latest revision as of 11:04, 18 March 2021

Gene SJ16882

  • transcription-direction:
    • positive
  • right-end-position:
    • 241752
  • left-end-position:
    • 234335
  • centisome-position:
    • 84.99514

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16882&oldid=133466"