Difference between revisions of "SJ16897"

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(Created page with "Category:gene == Gene SJ06412 == * transcription-direction: ** negative * right-end-position: ** 475814 * left-end-position: ** 464910 * centisome-position: ** 97.67427...")
(Created page with "Category:gene == Gene SJ16897 == * transcription-direction: ** negative * right-end-position: ** 67856 * left-end-position: ** 57781 * centisome-position: ** 20.95861...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06412 ==
+
== Gene SJ16897 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 475814
+
** 67856
 
* left-end-position:
 
* left-end-position:
−
** 464910
+
** 57781
 
* centisome-position:
 
* centisome-position:
−
** 97.67427    
+
** 20.95861    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7511]]
−
* [[ILEUSYN-PWY]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5078]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5103]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5104]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5101]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5108]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[LEU-DEG2-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5076]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7767]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LEUSYN-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[VALSYN-PWY]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ALANINE-VALINESYN-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5057]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[VALDEG-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=475814}}
+
{{#set: right-end-position=67856}}
−
{{#set: left-end-position=464910}}
+
{{#set: left-end-position=57781}}
−
{{#set: centisome-position=97.67427   }}
+
{{#set: centisome-position=20.95861   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=15}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ16897

  • transcription-direction:
    • negative
  • right-end-position:
    • 67856
  • left-end-position:
    • 57781
  • centisome-position:
    • 20.95861

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16897&oldid=133544"