Difference between revisions of "SJ16902"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7275 CPD-7275] == * common-name: ** (24r,25r)-3α,7α,12α,24-tetrahydroxy-5...")
(Created page with "Category:gene == Gene SJ00878 == * transcription-direction: ** negative * right-end-position: ** 91451 * left-end-position: ** 80082 * centisome-position: ** 49.763554...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7275 CPD-7275] ==
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== Gene SJ00878 ==
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* common-name:
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* transcription-direction:
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** (24r,25r)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl coa
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** negative
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* smiles:
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* right-end-position:
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** cc(ccc(o)c(c)c(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o)[ch]4(cc[ch]5(c(c)4c(o)c[ch]6([ch]5c(o)c[ch]7(c(c)6ccc(o)c7))))
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** 91451
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* inchi-key:
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* left-end-position:
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** pxhzoqnodupjkc-mtlgcjaasa-j
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** 80082
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* molecular-weight:
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* centisome-position:
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** 1212.144
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** 49.763554   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[1.17.99.3-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[4.2.1.107-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[1.1.1.8-RXN]]
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* [[1.17.99.3-RXN]]
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** Category: [[annotation]]
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* [[4.2.1.107-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=(24r,25r)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl coa}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=pxhzoqnodupjkc-mtlgcjaasa-j}}
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* [[6PGLUCONDEHYDROG-RXN]]
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{{#set: molecular-weight=1212.144}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[G3PD2]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[GLYC3PDEHYDROGBIOSYN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-9952]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6118]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7385]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7411]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[P122-PWY]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-7902]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5981]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY0-1319]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5667]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[OXIDATIVEPENT-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=91451}}
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{{#set: left-end-position=80082}}
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{{#set: centisome-position=49.763554    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=9}}

Revision as of 20:19, 18 December 2020

Gene SJ00878

  • transcription-direction:
    • negative
  • right-end-position:
    • 91451
  • left-end-position:
    • 80082
  • centisome-position:
    • 49.763554

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6118
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7411
    • 4 reactions found over 5 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-7902
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




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