Difference between revisions of "SJ17016"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMATE FORMATE] == * common-name: ** formate * smiles: ** [ch]([o-])=o * inchi-key: ** bdagihx...")
(Created page with "Category:gene == Gene SJ08362 == * transcription-direction: ** positive * right-end-position: ** 51205 * left-end-position: ** 45916 * centisome-position: ** 84.44477...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMATE FORMATE] ==
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== Gene SJ08362 ==
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* common-name:
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* transcription-direction:
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** formate
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** positive
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* smiles:
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* right-end-position:
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** [ch]([o-])=o
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** 51205
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* inchi-key:
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* left-end-position:
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** bdagihxwwsansr-uhfffaoysa-m
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** 45916
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* molecular-weight:
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* centisome-position:
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** 45.018
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** 84.44477   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[1.2.1.2-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[FORMATETHFLIG-RXN]]
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== Reaction(s) associated ==
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* [[FORthi]]
 
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* [[FTHFL]]
 
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* [[RXN0-723]]
 
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* [[RXN0-724]]
 
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* [[RXN0-745]]
 
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* [[RXN0-746]]
 
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== Reaction(s) known to produce the compound ==
 
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1.14.13.70-RXN]]
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* [[3.6.3.44-RXN]]
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* [[1.2.1.2-RXN]]
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** Category: [[annotation]]
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* [[3.5.1.27-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[3.5.1.88-RXN]]
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* [[ATPASE-RXN]]
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* [[ARYLFORMAMIDASE-RXN]]
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** Category: [[annotation]]
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* [[DIOHBUTANONEPSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[FORMATETHFLIG-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[FORMYLTHFDEFORMYL-RXN]]
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** Category: [[annotation]]
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* [[FORthi]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[FTHDF]]
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* [[RXN-12195]]
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* [[GTP-CYCLOHYDRO-I-RXN]]
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** Category: [[annotation]]
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* [[GTP-CYCLOHYDRO-II-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[OXALATE-DECARBOXYLASE-RXN]]
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* [[RXN-12196]]
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* [[PYRIMSYN1-RXN]]
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** Category: [[annotation]]
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* [[R147-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11881]]
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* [[RXN0-5462]]
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* [[RXN-13707]]
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** Category: [[annotation]]
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* [[RXN-13868]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13961]]
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* [[TRANS-RXN-311]]
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* [[RXN-17150]]
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** Category: [[annotation]]
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* [[RXN3O-130]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-13]]
 
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* [[RXN66-305]]
 
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* [[S-FORMYLGLUTATHIONE-HYDROLASE-RXN]]
 
 
</div>
 
</div>
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== Reaction(s) of unknown directionality ==
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== Pathway(s) associated ==
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{{#set: common-name=formate}}
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* [[PWY-6545]]
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{{#set: inchi-key=inchikey=bdagihxwwsansr-uhfffaoysa-m}}
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: molecular-weight=45.018}}
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=51205}}
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{{#set: left-end-position=45916}}
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{{#set: centisome-position=84.44477    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=7}}
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{{#set: nb pathway associated=4}}

Revision as of 20:21, 18 December 2020

Gene SJ08362

  • transcription-direction:
    • positive
  • right-end-position:
    • 51205
  • left-end-position:
    • 45916
  • centisome-position:
    • 84.44477

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17016&oldid=41425"