Difference between revisions of "SJ17017"

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(Created page with "Category:gene == Gene SJ13838 == * transcription-direction: ** positive * right-end-position: ** 36590 * left-end-position: ** 35376 * centisome-position: ** 10.72403...")
(Created page with "Category:gene == Gene SJ17017 == * transcription-direction: ** negative * right-end-position: ** 170322 * left-end-position: ** 148337 * centisome-position: ** 54.272087...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13838 ==
+
== Gene SJ17017 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 36590
+
** 170322
 
* left-end-position:
 
* left-end-position:
−
** 35376
+
** 148337
 
* centisome-position:
 
* centisome-position:
−
** 10.72403    
+
** 54.272087    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[2.4.1.223-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[2.4.1.94-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[2.4.2.38-RXN]]
−
{{#set: right-end-position=36590}}
+
** Category: [[orthology]]
−
{{#set: left-end-position=35376}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: centisome-position=10.72403   }}
+
* [[RXN-11889]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11890]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15205]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6558]]
 +
** '''7''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7920]]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7437]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=170322}}
 +
{{#set: left-end-position=148337}}
 +
{{#set: centisome-position=54.272087   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=3}}

Latest revision as of 11:08, 18 March 2021

Gene SJ17017

  • transcription-direction:
    • negative
  • right-end-position:
    • 170322
  • left-end-position:
    • 148337
  • centisome-position:
    • 54.272087

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway
  • PWY-7920
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-7437
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17017&oldid=135556"