Difference between revisions of "SJ17035"

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(Created page with "Category:gene == Gene SJ04728 == * transcription-direction: ** positive * right-end-position: ** 315846 * left-end-position: ** 308870 * centisome-position: ** 61.02703...")
(Created page with "Category:gene == Gene SJ19063 == * transcription-direction: ** positive * right-end-position: ** 162150 * left-end-position: ** 136755 * centisome-position: ** 58.97205...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04728 ==
+
== Gene SJ19063 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 315846
+
** 162150
 
* left-end-position:
 
* left-end-position:
−
** 308870
+
** 136755
 
* centisome-position:
 
* centisome-position:
−
** 61.02703    
+
** 58.97205    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSACETYLTRANS-RXN]]
+
* [[RXN-13729]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN3DJ-11230]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SGPL11]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7119]]
−
* [[PWY-5482]]
+
** '''4''' reactions found over '''11''' reactions in the full pathway
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY3DJ-11470]]
−
* [[PWY0-1312]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[P163-PWY]]
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5485]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[P3-PWY]]
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY4LZ-257]]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[METH-ACETATE-PWY]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-1281]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6637]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P161-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=315846}}
+
{{#set: right-end-position=162150}}
−
{{#set: left-end-position=308870}}
+
{{#set: left-end-position=136755}}
−
{{#set: centisome-position=61.02703   }}
+
{{#set: centisome-position=58.97205   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=2}}

Revision as of 09:25, 27 August 2019

Gene SJ19063

  • transcription-direction:
    • positive
  • right-end-position:
    • 162150
  • left-end-position:
    • 136755
  • centisome-position:
    • 58.97205

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7119
    • 4 reactions found over 11 reactions in the full pathway
  • PWY3DJ-11470
    • 3 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17035&oldid=29920"