Difference between revisions of "SJ17041"

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(Created page with "Category:gene == Gene SJ08289 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * PNKIN-RXN ** Category:...")
(Created page with "Category:gene == Gene SJ05434 == * transcription-direction: ** positive * right-end-position: ** 348738 * left-end-position: ** 327171 * centisome-position: ** 65.95219...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08289 ==
+
== Gene SJ05434 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 348738
 +
* left-end-position:
 +
** 327171
 +
* centisome-position:
 +
** 65.95219   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PNKIN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.7.10.1-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PYRAMKIN-RXN]]
+
* [[2.7.12.1-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PYRIDOXKIN-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
== Pathway(s) associated ==
+
* [[RXN-14906]]
−
* [[PLPSAL-PWY]]
+
** Category: [[annotation]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-7204]]
+
** Category: [[orthology]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PWY-7282]]
+
</div>
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=348738}}
 +
{{#set: left-end-position=327171}}
 +
{{#set: centisome-position=65.95219    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=3}}
 

Revision as of 11:08, 15 January 2021

Gene SJ05434

  • transcription-direction:
    • positive
  • right-end-position:
    • 348738
  • left-end-position:
    • 327171
  • centisome-position:
    • 65.95219

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17041&oldid=108643"