Difference between revisions of "SJ17064"
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(Created page with "Category:gene == Gene SJ17745 == * transcription-direction: ** positive * right-end-position: ** 176335 * left-end-position: ** 174248 * centisome-position: ** 67.978264...") |
(Created page with "Category:gene == Gene SJ21660 == * transcription-direction: ** positive * right-end-position: ** 227030 * left-end-position: ** 213067 * centisome-position: ** 18.835367...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21660 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 227030 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 213067 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 18.835367 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[AICARTRANSFORM-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[FPAIF]] |
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[IMPCYCLOHYDROLASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-6123]] | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-6124]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7234]] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=227030}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=213067}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=18.835367 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| + | {{#set: nb pathway associated=3}} | ||
Revision as of 08:17, 15 March 2021
Contents
Gene SJ21660
- transcription-direction:
- positive
- right-end-position:
- 227030
- left-end-position:
- 213067
- centisome-position:
- 18.835367
Organism(s) associated with this gene
Reaction(s) associated
- AICARTRANSFORM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- FPAIF
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- IMPCYCLOHYDROLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6123
- 4 reactions found over 6 reactions in the full pathway
- PWY-6124
- 5 reactions found over 5 reactions in the full pathway
- PWY-7234
- 3 reactions found over 6 reactions in the full pathway
