Difference between revisions of "SJ17079"

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(Created page with "Category:gene == Gene SJ20675 == * transcription-direction: ** positive * right-end-position: ** 11137 * left-end-position: ** 6884 * centisome-position: ** 3.3614595...")
(Created page with "Category:gene == Gene SJ12232 == * transcription-direction: ** positive * right-end-position: ** 121703 * left-end-position: ** 100518 * centisome-position: ** 13.141360...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20675 ==
+
== Gene SJ12232 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 11137
+
** 121703
 
* left-end-position:
 
* left-end-position:
−
** 6884
+
** 100518
 
* centisome-position:
 
* centisome-position:
−
** 3.3614595    
+
** 13.141360    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN1F-20]]
−
* [[1.3.99.5-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CHOLESTENONE-5-ALPHA-REDUCTASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[CORTISONE-ALPHA-REDUCTASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PROGESTERONE-5-ALPHA-REDUCTASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12124]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12267]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13682]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-711]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-9971]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-343]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6032]]
+
* [[PWY-5531]]
−
** '''1''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7455]]
+
* [[CHLOROPHYLL-SYN]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6943]]
+
* [[PWY-7159]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-699]]
 
−
** '''3''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY-2582]]
 
−
** '''4''' reactions found over '''21''' reactions in the full pathway
 
−
* [[PWY-6129]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY66-378]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=11137}}
+
{{#set: right-end-position=121703}}
−
{{#set: left-end-position=6884}}
+
{{#set: left-end-position=100518}}
−
{{#set: centisome-position=3.3614595   }}
+
{{#set: centisome-position=13.141360   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Revision as of 14:52, 5 January 2021

Gene SJ12232

  • transcription-direction:
    • positive
  • right-end-position:
    • 121703
  • left-end-position:
    • 100518
  • centisome-position:
    • 13.141360

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7159
    • 5 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17079&oldid=58119"